C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000087477 smg8-001 ENSDARG00000061378 7955 - 10:36261926-36271940 protein_coding

Danio rerio EnsemblZv9

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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000087477
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000087477 4.619±2.47 6.965±4.26 7.920±2.81 0.959±0.00 4.112±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039L CIL_00039L_0001 CGP 10:36261926-36280961

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 IEA nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Homologs

No Homologs available.

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