C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (sem
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000087661 sema5bb-001 ENSDARG00000075648 7955 + 6:3954418-4015752 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENSDART00000087661
Transcript ID Heart Kidney Muscle
ENSDART00000087661 0.223±0.03 1.828±1.72 0.073±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0007275 IEA multicellular organismal development
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050625 Sema5b-001 protein_coding Mus_musculus 0 315
ENSMUST00000120756 Sema5b-003 protein_coding Mus_musculus 0 315
ENSMUST00000133554 Sema5b-002 retained_intron Mus_musculus 0 233

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