C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stromal antigen 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000088094 stag2b-201 ENSDARG00000053668 7955 + 14:29513130-29545834 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000088094
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000088094 6.084±0.00 2.157±0.33 5.113±0.00 0.614±0.00 1.659±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GB CIL_0000GB_0001 CGP 14:29493295-29545834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317296 STAG3-001 protein_coding Homo_sapiens 0 255
ENST00000394018 STAG3-003 protein_coding Homo_sapiens 0 250
ENST00000426455 STAG3-004 protein_coding Homo_sapiens 0 255
ENST00000440830 STAG3-006 processed_transcript Homo_sapiens 0.00000000000007 84
ENST00000477469 STAG3-016 retained_intron Homo_sapiens 0.0000000000008 79
ENST00000491498 STAG3-020 processed_transcript Homo_sapiens 0.00000000000007 84
ENST00000496157 STAG3-002 retained_intron Homo_sapiens 0 250
ENST00000615138 STAG3-201 protein_coding Homo_sapiens 0 255
ENST00000620100 STAG3-202 protein_coding Homo_sapiens 0 250

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