C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin VIIAa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000088945 myo7aa-001 ENSDARG00000061937 7955 - 18:6455368-6543712 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000088945
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000088945 0.428±0.12 0.488±0.13 1.095±0.53 0.045±0.00 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001I4 CIL_0001I4_0001 CGP 18:6395511-6543712

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003774 IEA motor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005856 IEA cytoskeleton
GO:0006897 IMP endocytosis
GO:0007423 IMP sensory organ development
GO:0016459 IEA myosin complex
GO:0035315 IMP hair cell differentiation
GO:0050974 IMP detection of mechanical stimulus involved in sensory perception
GO:0060122 IMP inner ear receptor stereocilium organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084979 Myo7a-002 protein_coding Mus_musculus 0 3877
ENSMUST00000107122 Myo7a-003 protein_coding Mus_musculus 0 3805
ENSMUST00000107127 Myo7a-004 protein_coding Mus_musculus 0 3890
ENSMUST00000107128 Myo7a-001 protein_coding Mus_musculus 0 1136
ENSMUST00000156992 Myo7a-005 processed_transcript Mus_musculus 0 970
ENST00000409619 MYO7A-009 protein_coding Homo_sapiens 0 4008
ENST00000409709 MYO7A-001 protein_coding Homo_sapiens 0 1158
ENST00000409816 MYO7B-001 protein_coding Homo_sapiens 0 398
ENST00000428314 MYO7B-201 protein_coding Homo_sapiens 0 398
ENST00000458169 MYO7A-010 protein_coding Homo_sapiens 0 2333
ENST00000458637 MYO7A-002 protein_coding Homo_sapiens 0 4004
ENST00000481328 MYO7A-003 retained_intron Homo_sapiens 0 1109
ENST00000605744 MYO7A-004 processed_transcript Homo_sapiens 0 200

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