C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin VIIA
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409709 MYO7A-001 ENSG00000137474 9606 + 11:77128264-77215238 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverOvaryPlacentaENST00000409709
Transcript ID Bladder Brain Breast Kidney Liver Ovary Placenta
ENST00000409709 0.578±0.00 0.233±0.00 0.151±0.00 0.588±0.00 0.513±0.27 0.712±0.19 1.338±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001X7 CIL_0001X7_0002 CGP 11:77102840-77215239
CIL_0001JF CIL_0001JF_0002 CGP 11:77128264-77301687

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IDA microfilament motor activity
GO:0001750 IDA photoreceptor outer segment
GO:0001845 IEA phagolysosome assembly
GO:0001917 IDA photoreceptor inner segment
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005516 IMP calmodulin binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005765 IDA lysosomal membrane
GO:0005829 IDA cytosol
GO:0005856 IEA cytoskeleton
GO:0005902 IEA microvillus
GO:0006200 IEA ATP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006909 IEA phagocytosis
GO:0007040 IDA lysosome organization
GO:0007600 IEA sensory perception
GO:0007601 IMP visual perception
GO:0007605 IMP sensory perception of sound
GO:0008152 IDA metabolic process
GO:0016324 IEA apical plasma membrane
GO:0016459 IEA myosin complex
GO:0019904 IEA protein domain specific binding
GO:0030030 IEA cell projection organization
GO:0030048 IDA actin filament-based movement
GO:0030507 IDA spectrin binding
GO:0030898 IEA actin-dependent ATPase activity
GO:0031477 IEA myosin VII complex
GO:0032391 IEA photoreceptor connecting cilium
GO:0032403 IEA protein complex binding
GO:0032420 IEA stereocilium
GO:0042462 IC eye photoreceptor cell development
GO:0042470 IEA melanosome
GO:0042472 IEA inner ear morphogenesis
GO:0042490 IEA mechanoreceptor differentiation
GO:0042491 IEA auditory receptor cell differentiation
GO:0042803 IEA protein homodimerization activity
GO:0043531 IEA ADP binding
GO:0045202 IDA synapse
GO:0048563 IEA post-embryonic organ morphogenesis
GO:0048839 IEA inner ear development
GO:0050953 IMP sensory perception of light stimulus
GO:0050957 IMP equilibrioception
GO:0051015 IDA actin filament binding
GO:0051875 IEA pigment granule localization
GO:0051904 IEA pigment granule transport
GO:0060088 IEA auditory receptor cell stereocilium organization
GO:0060113 IEA inner ear receptor cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107128 Myo7a-001 protein_coding Mus_musculus 0 8521
ENSMUST00000107127 Myo7a-004 protein_coding Mus_musculus 0 5871
ENSMUST00000084979 Myo7a-002 protein_coding Mus_musculus 0 5858
ENSMUST00000107122 Myo7a-003 protein_coding Mus_musculus 0 5792
ENSMUST00000156992 Myo7a-005 processed_transcript Mus_musculus 0 2082
ENSDART00000088945 myo7aa-001 protein_coding Danio_rerio 0 1158
ENSMUST00000153657 Myo7a-008 protein_coding Mus_musculus 0 754
ENSMUST00000124787 Myo7a-012 retained_intron Mus_musculus 0 710
ENSMUST00000134663 Myo7b-001 protein_coding Mus_musculus 0 505
ENSMUST00000138627 Myo7a-006 protein_coding Mus_musculus 0 460
ENSMUST00000155637 Myo7a-009 processed_transcript Mus_musculus 0 448
ENSMUST00000152975 Myo7a-011 processed_transcript Mus_musculus 0 324
ENSMUST00000149079 Myo7a-010 processed_transcript Mus_musculus 0 315
ENSDART00000143547 myo15ab-001 protein_coding Danio_rerio 0.000000001 71

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