C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 1, epithelial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000097719 cdh1-201 ENSDARG00000024371 7955 + 7:56206925-56228078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000097719
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000097719 1.595±1.32 4.083±1.76 24.515±10.77 2.880±0.00 2.118±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Y9 CIL_0004Y9_0002 CGP 7:56111868-56228078

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001702 IMP gastrulation with mouth forming second
GO:0001764 IMP neuron migration
GO:0001841 IMP neural tube formation
GO:0001965 IPI G-protein alpha-subunit binding
GO:0003370 IMP cell-cell adhesion involved in mesendodermal cell migration
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0005902 IDA microvillus
GO:0005913 IDA cell-cell adherens junction
GO:0005938 IDA cell cortex
GO:0007155 IEA cell adhesion
GO:0007156 IEA homophilic cell adhesion
GO:0007398 IMP ectoderm development
GO:0008354 IMP germ cell migration
GO:0016020 IEA membrane
GO:0016021 ISS integral to membrane
GO:0016337 IMP cell-cell adhesion
GO:0016342 IDA catenin complex
GO:0034334 IMP adherens junction maintenance
GO:0042074 IMP cell migration involved in gastrulation
GO:0055113 IGI epiboly involved in gastrulation with mouth forming second
GO:0070586 IMP cell-cell adhesion involved in gastrulation

Homologs

No Homologs available.

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