C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit 6 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000099628 eif3s6ip-201 ENSDARG00000006729 7955 - 13:43886612-43922171 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000099628
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000099628 13.192±11.79 49.464±17.83 47.101±0.00 60.965±0.00 49.097±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IEA translation initiation factor activity
GO:0005737 IEA cytoplasm
GO:0005852 IEA eukaryotic translation initiation factor 3 complex
GO:0006412 IEA translation
GO:0006413 ISS translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0033290 IEA eukaryotic 48S preinitiation complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040518 Eif3l-201 protein_coding Mus_musculus 0 1421
ENST00000381683 EIF3L-013 protein_coding Homo_sapiens 0 998
ENST00000406934 EIF3L-002 protein_coding Homo_sapiens 0 1120
ENST00000412331 EIF3L-001 protein_coding Homo_sapiens 0 1293
ENST00000457262 EIF3LP2-001 processed_pseudogene Homo_sapiens 0 726
ENST00000477256 EIF3L-004 retained_intron Homo_sapiens 0 1267
ENST00000482600 EIF3L-003 retained_intron Homo_sapiens 0 1003
ENST00000495197 EIF3LP3-001 processed_pseudogene Homo_sapiens 0 667
ENST00000554099 EIF3LP1-001 processed_pseudogene Homo_sapiens 0 889
ENST00000624234 EIF3L-201 protein_coding Homo_sapiens 0 1293

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