C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit L
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000624234 EIF3L-201 ENSG00000100129 9606 + 22:37849372-37888782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000624234
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000624234 8.034±0.00 16.944±0.00 16.434±0.00 24.926±0.00 8.573±0.00 22.653±0.00 24.167±0.00 17.531±0.00 18.401±0.00 84.147±46.35 69.764±11.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0001 VISTA 22:37683926-38284300
CIL_0008KJ CIL_0008KJ_0001 VISTA 22:37685616-38286450
CIL_0008BX CIL_0008BX_0001 VISTA 22:37696030-38296592
CIL_0008KA CIL_0008KA_0001 VISTA 22:37698338-38299192
CIL_00082J CIL_00082J_0001 VISTA 22:37733233-38334508
CIL_0008C1 CIL_0008C1_0001 VISTA 22:37746133-38346872
CIL_00082K CIL_00082K_0001 VISTA 22:37750385-38350990
CIL_0003QH CIL_0003QH_0001 CGP 22:37830855-37889407
CIL_0003QI CIL_0003QI_0001 CGP 22:37848868-37942822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001650 IEA fibrillar center
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IC:IEA translation initiation factor activity
GO:0005515 IPI protein binding
GO:0005654 IEA nucleoplasm
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005852 IDA:IEA eukaryotic translation initiation factor 3 complex
GO:0006413 IC translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0016020 IDA membrane
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040518 Eif3l-201 protein_coding Mus_musculus 0 2143
ENSDART00000130021 eif3s6ip-202 protein_coding Danio_rerio 0 1293
ENSDART00000099628 eif3s6ip-201 protein_coding Danio_rerio 0 1293

Loading