C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000099994 hspa8-001 ENSDARG00000068992 7955 + 10:30757254-30761585 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000099994
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000099994 484.523±147.18 419.139±287.58 282.535±370.47 459.812±0.00 333.811±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015800 Hspa8-001 protein_coding Mus_musculus 0 1812
ENSMUST00000117405 Gm15459-001 processed_pseudogene Mus_musculus 0 1829
ENSMUST00000117557 Hspa8-003 protein_coding Mus_musculus 0 1411
ENSMUST00000117870 Hspa8-009 protein_coding Mus_musculus 0 303
ENSMUST00000120949 Gm9436-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000122434 Gm13437-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000127699 Hspa8-008 retained_intron Mus_musculus 0 276
ENSMUST00000133964 Hspa8-005 protein_coding Mus_musculus 0 303
ENSMUST00000138895 Hspa8-004 retained_intron Mus_musculus 0 303
ENSMUST00000140984 Hspa8-007 retained_intron Mus_musculus 0 545
ENSMUST00000149936 Hspa8-002 retained_intron Mus_musculus 0 802
ENSMUST00000177767 Gm8355-201 processed_pseudogene Mus_musculus 0 704
ENSMUST00000187358 RP23-241J21.1-001 processed_pseudogene Mus_musculus 0 1500
ENSMUST00000188705 RP23-76C10.2-001 processed_pseudogene Mus_musculus 0 1362
ENSMUST00000190856 RP24-302H24.1-001 processed_pseudogene Mus_musculus 0 1092

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