C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 8355
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177767 Gm8355-201 ENSMUSG00000093798 10090 - 10:14745362-14746117 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000177767
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000177767 4.701±0.77 0.327±0.10 14.090±13.76 14.304±9.97 2.067±0.94 0.354±0.17 1.578±0.64 1.730±0.59 6.312±13.60 0.715±0.17 0.092±0.04 5.947±6.49 0.259±0.14 0.324±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030N CIL_00030N_0003 CGP 10:14705591-14770850

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000099994 hspa8-001 protein_coding Danio_rerio 0 704
ENSDART00000043743 HSPA8 (1 of 2)-001 protein_coding Danio_rerio 0 564
ENSDART00000152740 HSPA8 (1 of 2)-002 processed_transcript Danio_rerio 0 281
ENSDART00000141549 hspa8-003 protein_coding Danio_rerio 0 265
ENST00000227378 HSPA8-006 protein_coding Homo_sapiens 0 926
ENST00000309758 HSPA6-001 protein_coding Homo_sapiens 0 363
ENST00000375654 HSPA1L-001 protein_coding Homo_sapiens 0 366
ENST00000383390 HSPA1L-001 protein_coding Homo_sapiens 0 372
ENST00000397642 RP11-488L18.1-001 processed_pseudogene Homo_sapiens 0 815
ENST00000417601 HSPA1L-001 protein_coding Homo_sapiens 0 366
ENST00000425843 HSPA8P1-001 processed_pseudogene Homo_sapiens 0 701
ENST00000426095 HSPA1L-001 protein_coding Homo_sapiens 0 366
ENST00000445535 HSPA7-001 unprocessed_pseudogene Homo_sapiens 0 296
ENST00000453788 HSPA8-002 protein_coding Homo_sapiens 0 265
ENST00000456772 HSPA1L-001 protein_coding Homo_sapiens 0 372
ENST00000456928 HSPA8P5-001 processed_pseudogene Homo_sapiens 0 822
ENST00000508840 HSPA8P11-001 unprocessed_pseudogene Homo_sapiens 0 431
ENST00000511877 HSPA8P4-001 processed_pseudogene Homo_sapiens 0 569
ENST00000524552 HSPA8-027 protein_coding Homo_sapiens 0 863
ENST00000526110 HSPA8-009 protein_coding Homo_sapiens 0 926
ENST00000526686 HSPA8-028 protein_coding Homo_sapiens 0 556
ENST00000526862 HSPA8-026 processed_transcript Homo_sapiens 0.000000004 66
ENST00000532091 HSPA8-025 retained_intron Homo_sapiens 0 527
ENST00000532636 HSPA8-004 protein_coding Homo_sapiens 0 926
ENST00000533540 HSPA8-003 protein_coding Homo_sapiens 0 926
ENST00000534319 HSPA8-010 protein_coding Homo_sapiens 0 926
ENST00000534624 HSPA8-001 protein_coding Homo_sapiens 0 926

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