C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 8 (sodium-calcium exchanger), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000100204 slc8a3-001 ENSDARG00000004931 7955 - 13:36598377-36666460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000100204
Transcript ID Brain Heart Kidney Muscle
ENSDART00000100204 1.349±0.33 0.159±0.11 0.342±0.00 0.812±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006J1 CIL_0006J1_0001 CGP 13:36598377-36720907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005432 IEA calcium:sodium antiporter activity
GO:0006816 IEA calcium ion transport
GO:0007154 IEA cell communication
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0035725 ISS sodium ion transmembrane transport
GO:0055085 IEA transmembrane transport
GO:0070588 ISS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236877 SLC8A2-001 protein_coding Homo_sapiens 0 481
ENST00000539381 SLC8A2-004 processed_transcript Homo_sapiens 0 481
ENST00000542837 SLC8A2-003 protein_coding Homo_sapiens 0 481
ENST00000600576 SLC8A2-008 retained_intron Homo_sapiens 0 329

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