C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: catenin (cadherin-associated protein), alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000101306 ctnna2-002 ENSDARG00000024785 7955 + 1:42607716-43418249 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000101306
Transcript ID Brain Heart Kidney
ENSDART00000101306 4.647±0.00 0.524±0.06 0.555±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0007155 IEA cell adhesion
GO:0015629 IEA actin cytoskeleton
GO:0045296 IEA cadherin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042345 Ctnna1-201 protein_coding Mus_musculus 0 1123
ENSMUST00000075340 Ctnna2-201 protein_coding Mus_musculus 0 1688
ENSMUST00000159626 Ctnna2-003 protein_coding Mus_musculus 0 1469
ENSMUST00000160894 Ctnna2-002 protein_coding Mus_musculus 0 1469
ENSMUST00000161846 Ctnna2-001 protein_coding Mus_musculus 0 1688
ENST00000302763 CTNNA1-001 protein_coding Homo_sapiens 0 1088
ENST00000518825 CTNNA1-006 protein_coding Homo_sapiens 1e-21 110
ENST00000520520 CTNNA1-040 protein_coding Homo_sapiens 2e-22 110
ENST00000521724 CTNNA1-003 nonsense_mediated_decay Homo_sapiens 0 1088
ENST00000522792 CTNNA1-005 retained_intron Homo_sapiens 0 233
ENST00000540387 CTNNA1-201 protein_coding Homo_sapiens 0 937

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