C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SATB homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000101631 SATB1-201 ENSDARG00000062621 7955 - 16:52796561-52908675 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000101631
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000101631 5.945±2.02 0.404±0.20 0.507±0.03 0.067±0.00 1.220±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OK CIL_0007OK_0003 UCNEbase 16:52595612-53002021

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133574 Satb1-005 protein_coding Mus_musculus 8e-29 134
ENSMUST00000144331 Satb1-001 protein_coding Mus_musculus 2e-37 163
ENSMUST00000169480 Satb1-201 protein_coding Mus_musculus 2e-37 163
ENST00000338745 SATB1-001 protein_coding Homo_sapiens 0 399
ENST00000417717 SATB1-004 protein_coding Homo_sapiens 0 399
ENST00000454909 SATB1-002 protein_coding Homo_sapiens 0 399

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