Transcript ID | Adrenal | Brain | Colon | Kidney | Liver | Lung | Muscle | Ovary | Testis |
---|---|---|---|---|---|---|---|---|---|
ENST00000454909 | 3.768±0.00 | 9.568±0.00 | 5.714±0.00 | 3.222±0.00 | 0.930±0.00 | 2.755±0.00 | 3.353±0.00 | 0.952±0.00 | 4.089±0.98 |
Transcript Info |
||||||
Description: | SATB homeobox 1 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000454909 | SATB1-002 | ENSG00000182568 | 9606 | - | 3:18347940-18438773 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0004HQ | CIL_0004HQ_0001 | CGP | 3:17157162-18445588 |
CIL_0007OK | CIL_0007OK_0001 | UCNEbase | 3:17286171-18992888 |
CIL_000816 | CIL_000816_0001 | VISTA | 3:17827870-18428745 |
CIL_0004HR | CIL_0004HR_0001 | CGP | 3:18345387-19535646 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000122 | IMP | negative regulation of transcription from RNA polymerase II promoter |
GO:0003677 | IEA | DNA binding |
GO:0003690 | TAS | double-stranded DNA binding |
GO:0005515 | IPI | protein binding |
GO:0005634 | IDA | nucleus |
GO:0005654 | TAS | nucleoplasm |
GO:0006325 | TAS | chromatin organization |
GO:0006351 | IEA | transcription, DNA-templated |
GO:0006915 | TAS | apoptotic process |
GO:0006921 | TAS | cellular component disassembly involved in execution phase of apoptosis |
GO:0016032 | IEA | viral process |
GO:0016605 | IDA | PML body |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000169480 | Satb1-201 | protein_coding | Mus_musculus | 0 | 4641 |
ENSMUST00000144331 | Satb1-001 | protein_coding | Mus_musculus | 0 | 4569 |
ENSMUST00000133574 | Satb1-005 | protein_coding | Mus_musculus | 0 | 4202 |
ENSMUST00000129667 | Satb1-003 | protein_coding | Mus_musculus | 0 | 3591 |
ENSMUST00000176669 | Satb1-012 | protein_coding | Mus_musculus | 0 | 3506 |
ENSMUST00000152830 | Satb1-002 | protein_coding | Mus_musculus | 0 | 3485 |
ENSMUST00000140979 | Satb1-004 | protein_coding | Mus_musculus | 0 | 2593 |
ENSMUST00000140727 | Satb1-013 | processed_transcript | Mus_musculus | 0 | 769 |
ENSMUST00000129205 | Satb1-011 | protein_coding | Mus_musculus | 0 | 741 |
ENSMUST00000137697 | Satb1-009 | retained_intron | Mus_musculus | 0 | 483 |
ENSMUST00000121556 | Gm15263-001 | processed_pseudogene | Mus_musculus | 0 | 442 |
ENSMUST00000124222 | Satb1-008 | protein_coding | Mus_musculus | 0 | 407 |
ENSDART00000101631 | SATB1-201 | protein_coding | Danio_rerio | 0 | 399 |
ENSMUST00000146414 | Satb1-006 | retained_intron | Mus_musculus | 0 | 394 |
ENSMUST00000156051 | Satb1-007 | retained_intron | Mus_musculus | 3.99931e-42 | 178 |
ENSMUST00000148559 | Satb1-010 | protein_coding | Mus_musculus | 2e-35 | 156 |
ENSDART00000055756 | tbc1d12a-001 | protein_coding | Danio_rerio | 0.0002 | 53 |