C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class I, type 8B, member 5b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000109548 atp8b5b-201 ENSDARG00000079235 7955 - 10:17087656-17119607 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000109548
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000109548 0.101±0.05 0.324±0.16 25.301±10.68 7.478±0.00 0.509±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0006812 IEA cation transport
GO:0015914 IEA phospholipid transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016787 IEA hydrolase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025482 Atp8b1-201 protein_coding Mus_musculus 0 209
ENST00000284509 ATP8B4-201 protein_coding Homo_sapiens 0 233
ENST00000368489 ATP8B2-001 protein_coding Homo_sapiens 0 335
ENST00000557955 ATP8B4-003 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000558906 ATP8B4-002 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000559726 ATP8B4-007 nonsense_mediated_decay Homo_sapiens 0 233
ENST00000559829 ATP8B4-001 protein_coding Homo_sapiens 0 233
ENST00000559998 ATP8B4-012 retained_intron Homo_sapiens 3.00004e-41 172
ENST00000560161 ATP8B4-017 processed_transcript Homo_sapiens 0 211
ENST00000560479 ATP8B4-005 protein_coding Homo_sapiens 0 233
ENST00000561104 ATP8B4-013 retained_intron Homo_sapiens 0.00000002 64
ENST00000561385 ATP8B4-004 retained_intron Homo_sapiens 0 211

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