C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FERM domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000113280 FRMD5 (1 of 2)-201 ENSDARG00000075942 7955 - 18:26402611-26454918 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000113280
Transcript ID Brain Heart Kidney Muscle
ENSDART00000113280 2.358±2.94 0.062±0.00 0.047±0.00 0.286±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005856 IEA cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110592 Frmd5-006 protein_coding Mus_musculus 0 955
ENSMUST00000121219 Frmd5-005 protein_coding Mus_musculus 0 952
ENST00000402883 FRMD5-009 protein_coding Homo_sapiens 0 758
ENST00000417257 FRMD5-001 protein_coding Homo_sapiens 0 950
ENST00000421674 FRMD5-003 nonsense_mediated_decay Homo_sapiens 0 752
ENST00000449926 FRMD5-006 protein_coding Homo_sapiens 0 752
ENST00000451277 FRMD5-010 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000458630 FRMD5-004 nonsense_mediated_decay Homo_sapiens 0 516
ENST00000479319 FRMD5-007 retained_intron Homo_sapiens 0 207
ENST00000484674 FRMD5-005 protein_coding Homo_sapiens 0 699
ENST00000558108 FRMD5-012 protein_coding Homo_sapiens 0 370
ENST00000618556 FRMD5-201 protein_coding Homo_sapiens 0 516

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