C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: slingshot homolog 2b (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000113436 ssh2b-201 ENSDARG00000077623 7955 + 21:39253534-39314828 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000113436
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000113436 9.043±7.58 6.265±2.07 4.354±1.12 0.452±0.00 16.175±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005575 ND cellular_component
GO:0006470 IEA protein dephosphorylation
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0016787 IEA hydrolase activity
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326470 SSH1-003 protein_coding Homo_sapiens 0 248
ENST00000326495 SSH1-001 protein_coding Homo_sapiens 0 248
ENST00000547862 SSH1-010 retained_intron Homo_sapiens 5e-24 115
ENST00000548522 SSH1-005 nonsense_mediated_decay Homo_sapiens 5e-24 115
ENST00000551165 SSH1-002 protein_coding Homo_sapiens 0 248

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