C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | slingshot protein phosphatase 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000548522  |
SSH1-005 |
ENSG00000084112 |
9606 | - |
12:108807675-108857513  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001GO | CIL_0001GO_0002 | CGP | 12:108645109-108857590 |
| CIL_0001VP | CIL_0001VP_0001 | CGP | 12:108778192-108901043 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000077689
|
Ssh1-003 | protein_coding | Mus_musculus | 0 | 606 |
|
ENSMUST00000159592
|
Ssh1-001 | protein_coding | Mus_musculus | 0 | 606 |
|
ENSMUST00000159510
|
Ssh1-004 | nonsense_mediated_decay | Mus_musculus | 0 | 401 |
|
ENSMUST00000112298
|
Ssh1-002 | protein_coding | Mus_musculus | 0 | 296 |
|
ENSMUST00000162396
|
Ssh1-005 | protein_coding | Mus_musculus | 0 | 209 |
|
ENSMUST00000162322
|
Ssh1-006 | retained_intron | Mus_musculus | 2e-33 | 147 |
|
ENSDART00000113436
|
ssh2b-201 | protein_coding | Danio_rerio | 5e-24 | 115 |
|
ENSDART00000137444
|
ssh2b-001 | protein_coding | Danio_rerio | 5e-24 | 115 |
