C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) II (DNA directed) polypeptide E, 25kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000113964 POLR2E (2 of 2)-201 ENSDARG00000074274 7955 + 2:57385084-57398104 protein_coding

Danio rerio EnsemblZv9

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverENSDART00000113964
Transcript ID Brain Kidney Liver
ENSDART00000113964 0.126±0.00 5.080±0.00 0.113±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000215587 POLR2E-012 nonsense_mediated_decay Homo_sapiens 0 449
ENST00000585838 POLR2E-014 protein_coding Homo_sapiens 0 359
ENST00000586215 POLR2E-008 retained_intron Homo_sapiens 0.0000000000002 81
ENST00000586746 POLR2E-010 protein_coding Homo_sapiens 0 520
ENST00000586817 POLR2E-003 retained_intron Homo_sapiens 0 484
ENST00000589737 POLR2E-006 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000590060 POLR2E-007 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000591709 POLR2E-005 retained_intron Homo_sapiens 0 296
ENST00000591767 POLR2E-002 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000612655 POLR2E-013 protein_coding Homo_sapiens 0 520
ENST00000614705 POLR2E-011 processed_transcript Homo_sapiens 0 435
ENST00000615234 POLR2E-001 protein_coding Homo_sapiens 0 520
ENST00000619917 POLR2E-009 protein_coding Homo_sapiens 0 296

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