C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) II (DNA directed) polypeptide E, 25kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619917 POLR2E-009 ENSG00000099817 9606 - 19:1088388-1095366 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyTestisENST00000619917
Transcript ID Adipose Brain Breast Colon Kidney Testis
ENST00000619917 58.223±0.00 32.031±0.00 77.633±0.00 50.663±0.00 25.111±0.00 42.859±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HU CIL_0000HU_0001 CGP 19:1040101-1086628
CIL_00030S CIL_00030S_0001 CGP 19:1065923-1095380
CIL_0000QU CIL_0000QU_0001 CGP 19:1086579-1106791

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152843 Polr2e-005 retained_intron Mus_musculus 0 462
ENSMUST00000131743 Polr2e-003 retained_intron Mus_musculus 0 462
ENSMUST00000004786 Polr2e-001 protein_coding Mus_musculus 0 462
ENSDART00000113964 POLR2E (2 of 2)-201 protein_coding Danio_rerio 0 296
ENSMUST00000143438 Polr2e-002 retained_intron Mus_musculus 0 281

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