C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRY-box containing gene 19a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000114113 sox19a-001 ENSDARG00000010770 7955 - 5:25868115-25870372 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000114113
Transcript ID Brain Heart Kidney Muscle
ENSDART00000114113 2.730±1.61 0.084±0.00 0.168±0.00 0.285±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 IC transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0007399 IEA nervous system development
GO:0030154 IEA cell differentiation
GO:0051091 IDA positive regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170662 Sox21-001 protein_coding Mus_musculus 0 198
ENST00000325404 SOX2-001 protein_coding Homo_sapiens 0 211

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