C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) I polypeptide B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000114741 polr1b-001 ENSDARG00000077469 7955 + 13:42570587-42593448 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000114741
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000114741 1.182±0.78 1.577±0.12 3.212±0.00 3.794±0.00 1.080±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001054 IBA RNA polymerase I activity
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005634 IEA nucleus
GO:0005736 IBA DNA-directed RNA polymerase I complex
GO:0006351 IEA transcription, DNA-templated
GO:0016740 IEA transferase activity
GO:0016779 IEA nucleotidyltransferase activity
GO:0032549 IEA ribonucleoside binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263331 POLR1B-001 protein_coding Homo_sapiens 0 863
ENST00000333990 POLR1B-002 nonsense_mediated_decay Homo_sapiens 0 863
ENST00000409894 POLR1B-003 protein_coding Homo_sapiens 0 555
ENST00000417433 POLR1B-005 protein_coding Homo_sapiens 0 863
ENST00000448770 POLR1B-004 nonsense_mediated_decay Homo_sapiens 0 566
ENST00000458012 POLR1B-015 protein_coding Homo_sapiens 0 191
ENST00000537335 POLR1B-201 protein_coding Homo_sapiens 0 761
ENST00000541869 POLR1B-202 protein_coding Homo_sapiens 0 863

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