C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Transporter
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000121462 CU856173.1-201 ENSDARG00000091560 7955 - 19:662020-682602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000121462
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000121462 0.392±0.33 0.541±0.28 11.956±0.82 0.104±0.00 1.109±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0006836 IEA neurotransmitter transport
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022048 Slc6a19-001 protein_coding Mus_musculus 0 682
ENSMUST00000120322 Slc6a19-004 processed_transcript Mus_musculus 0 507
ENSMUST00000123997 Slc6a19-008 processed_transcript Mus_musculus 0 292
ENSMUST00000124406 Slc6a19-005 nonsense_mediated_decay Mus_musculus 2e-33 147
ENSMUST00000132085 Slc6a19-003 retained_intron Mus_musculus 0 388
ENSMUST00000139087 Slc6a19-006 processed_transcript Mus_musculus 0 202
ENSMUST00000140878 Slc6a19-007 processed_transcript Mus_musculus 3e-29 132
ENST00000304460 SLC6A19-001 protein_coding Homo_sapiens 0 710
ENST00000515652 SLC6A19-002 nonsense_mediated_decay Homo_sapiens 0 248

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