C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000122101 tbx2b-001 ENSDARG00000006120 7955 + 15:26713282-26720228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverENSDART00000122101
Transcript ID Brain Heart Liver
ENSDART00000122101 2.002±0.00 1.679±0.00 0.828±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JV CIL_0007JV_0004 UCNEbase 15:26449307-26854804

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001947 IMP heart looping
GO:0003205 IGI cardiac chamber development
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007155 IMP cell adhesion
GO:0007275 IEA multicellular organismal development
GO:0007420 IMP brain development
GO:0008016 IMP regulation of heart contraction
GO:0008283 IMP cell proliferation
GO:0021538 IMP epithalamus development
GO:0030903 IMP notochord development
GO:0035050 IMP embryonic heart tube development
GO:0042074 IMP cell migration involved in gastrulation
GO:0043704 IMP photoreceptor cell fate specification
GO:0046548 IMP retinal rod cell development
GO:0046549 IMP retinal cone cell development
GO:0048318 IDA axial mesoderm development
GO:0048663 IMP neuron fate commitment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000177694 TBX21-001 protein_coding Homo_sapiens 0.0000000000008 81

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