C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000177694 TBX21-001 ENSG00000073861 9606 + 17:47733244-47746119 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000177694
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000177694 0.121±0.00 2.102±0.00 0.067±0.00 0.042±0.00 0.397±0.00 0.051±0.00 0.074±0.04 0.149±0.00 0.303±0.06 2.641±2.19 0.384±0.00 0.356±0.16 0.319±0.19 0.864±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DB CIL_0004DB_0002 CGP 17:47694081-47746119
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0004DC CIL_0004DC_0002 CGP 17:47733244-47821834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 TAS:IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS:IEA regulation of transcription, DNA-templated
GO:0007275 TAS multicellular organismal development
GO:0009615 IEP response to virus
GO:0030217 IEA T cell differentiation
GO:0043025 IEA neuronal cell body
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0048304 IEA positive regulation of isotype switching to IgG isotypes
GO:0050776 IEA regulation of immune response
GO:0071310 IEA cellular response to organic substance
GO:0072676 IDA lymphocyte migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001484 Tbx21-001 protein_coding Mus_musculus 0 1746
ENSDART00000005491 tbx2b-201 protein_coding Danio_rerio 0.0000000000008 81
ENSDART00000122101 tbx2b-001 protein_coding Danio_rerio 0.0000000000008 81

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