C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, alpha 6b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000124708 gabra6b-201 ENSDARG00000058736 7955 - 21:40623673-40667527 protein_coding

Danio rerio EnsemblZv9

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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENSDART00000124708
Transcript ID Heart Kidney Muscle
ENSDART00000124708 0.711±0.00 0.303±0.00 0.434±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016Q CIL_00016Q_0001 CGP 21:40623673-40733556

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005216 IEA ion channel activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335625 GABRA5-001 protein_coding Homo_sapiens 0 342
ENST00000355395 GABRA5-002 protein_coding Homo_sapiens 0 342
ENST00000400081 GABRA5-201 protein_coding Homo_sapiens 0 342

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