C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATG9 autophagy related 9 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000125002 atg9a-201 ENSDARG00000044551 7955 + 6:11161937-11177563 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000125002
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000125002 12.086±5.10 5.548±2.39 1.810±0.00 0.431±0.00 13.379±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040689 Atg9a-201 protein_coding Mus_musculus 0 800
ENSMUST00000188347 Atg9a-001 protein_coding Mus_musculus 0 800
ENSMUST00000188430 Atg9a-004 retained_intron Mus_musculus 0 189
ENSMUST00000189665 Atg9a-003 nonsense_mediated_decay Mus_musculus 1.4013e-45 189
ENSMUST00000189702 Atg9a-002 protein_coding Mus_musculus 0 800
ENSMUST00000189820 Atg9a-005 protein_coding Mus_musculus 0 785

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