C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: homeo box C9a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000127384 hoxc9a-001 ENSDARG00000092809 7955 + 23:36146804-36149032 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000127384
Transcript ID Brain Heart Muscle
ENSDART00000127384 0.145±0.00 0.377±0.00 1.693±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TN CIL_0002TN_0001 CGP 23:36146804-36155179

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding
GO:2001213 IGI negative regulation of vasculogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059272 Hoxd9-001 protein_coding Mus_musculus 8.00001e-42 176

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