C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Uncharacterized protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000128055 CABZ01075947.1-201 ENSDARG00000090933 7955 - 12:46534914-46571621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000128055
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000128055 1.297±0.99 0.066±0.04 0.132±0.00 0.009±0.00 0.540±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HS CIL_0001HS_0001 CGP 12:46534914-46621518

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IEA ARF guanyl-nucleotide exchange factor activity
GO:0032012 IEA regulation of ARF protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115716 Psd2-001 protein_coding Mus_musculus 1e-22 113
ENSMUST00000175720 Psd2-006 retained_intron Mus_musculus 2e-18 97
ENSMUST00000175734 Psd2-005 protein_coding Mus_musculus 2e-21 110
ENSMUST00000176472 Psd2-002 nonsense_mediated_decay Mus_musculus 1e-22 113
ENSMUST00000176873 Psd2-004 protein_coding Mus_musculus 2e-21 110
ENSMUST00000177432 Psd2-003 protein_coding Mus_musculus 1e-22 113
ENST00000489702 IRF5-003 protein_coding Homo_sapiens 0.00004 53

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