C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000128198 SCN3A-201 ENSDARG00000090724 7955 + 2:52560070-52618354 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000128198
Transcript ID Brain
ENSDART00000128198 0.186±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066432 Scn3a-201 protein_coding Mus_musculus 0 375
ENSMUST00000100069 Scn3a-001 protein_coding Mus_musculus 0 381
ENSMUST00000126837 Scn3a-002 protein_coding Mus_musculus 0 309
ENST00000283254 SCN3A-001 protein_coding Homo_sapiens 0 348
ENST00000360093 SCN3A-201 protein_coding Homo_sapiens 0 303
ENST00000409101 SCN3A-002 protein_coding Homo_sapiens 0 303
ENST00000440431 SCN3A-004 protein_coding Homo_sapiens 0 348
ENST00000453007 SCN3A-003 protein_coding Homo_sapiens 3e-33 147

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