C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high density lipoprotein-binding protein b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000128279 hdlbpb-201 ENSDARG00000061864 7955 + 12:23763471-23800679 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000128279
Transcript ID Brain Heart Kidney Liver
ENSDART00000128279 1.529±0.79 1.319±1.24 0.076±0.00 0.333±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042498 Hdlbp-003 protein_coding Mus_musculus 0 743
ENSMUST00000170883 Hdlbp-001 protein_coding Mus_musculus 0 743
ENSMUST00000186164 Hdlbp-004 protein_coding Mus_musculus 0 274
ENSMUST00000186787 Hdlbp-008 protein_coding Mus_musculus 1e-34 150
ENSMUST00000188988 Hdlbp-010 protein_coding Mus_musculus 0 196
ENSMUST00000189025 Hdlbp-006 protein_coding Mus_musculus 4e-31 139
ENSMUST00000189951 Hdlbp-002 retained_intron Mus_musculus 0 307

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