C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high density lipoprotein (HDL) binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189025 Hdlbp-006 ENSMUSG00000034088 10090 - 1:93437155-93478815 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000473 CIL_000473_0002 CGP 1:93373930-93478815
CIL_0002JH CIL_0002JH_0002 CGP 1:93405940-93510260

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000128279 hdlbpb-201 protein_coding Danio_rerio 4e-31 139
ENSDART00000153055 hdlbpb-001 protein_coding Danio_rerio 4e-31 139
ENST00000310931 HDLBP-003 protein_coding Homo_sapiens 0 656
ENST00000391975 HDLBP-001 protein_coding Homo_sapiens 0 656
ENST00000391976 HDLBP-002 protein_coding Homo_sapiens 0 656
ENST00000413241 HDLBP-012 protein_coding Homo_sapiens 0 375
ENST00000417540 HDLBP-009 protein_coding Homo_sapiens 0 189
ENST00000420451 HDLBP-016 protein_coding Homo_sapiens 0 320
ENST00000422080 HDLBP-029 protein_coding Homo_sapiens 0 359
ENST00000422933 HDLBP-031 protein_coding Homo_sapiens 0 656
ENST00000423693 HDLBP-013 protein_coding Homo_sapiens 0 460
ENST00000425989 HDLBP-006 protein_coding Homo_sapiens 0 453
ENST00000426343 HDLBP-024 protein_coding Homo_sapiens 0 442
ENST00000427007 HDLBP-028 protein_coding Homo_sapiens 0 211
ENST00000427183 HDLBP-201 protein_coding Homo_sapiens 0 569
ENST00000428482 HDLBP-015 protein_coding Homo_sapiens 0 656
ENST00000430918 HDLBP-019 protein_coding Homo_sapiens 0 656
ENST00000441124 HDLBP-011 protein_coding Homo_sapiens 0 643
ENST00000442714 HDLBP-020 protein_coding Homo_sapiens 0 529
ENST00000444092 HDLBP-025 protein_coding Homo_sapiens 0 658
ENST00000449504 HDLBP-022 protein_coding Homo_sapiens 0 200
ENST00000449864 HDLBP-021 protein_coding Homo_sapiens 0 239
ENST00000452065 HDLBP-027 protein_coding Homo_sapiens 0 656
ENST00000453141 HDLBP-033 protein_coding Homo_sapiens 6e-25 119
ENST00000458564 HDLBP-030 protein_coding Homo_sapiens 0 329
ENST00000462130 HDLBP-008 processed_transcript Homo_sapiens 1e-28 130
ENST00000496569 HDLBP-007 processed_transcript Homo_sapiens 1e-28 130

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