C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoid x receptor, beta b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000128914 rxrbb-201 ENSDARG00000002006 7955 + 16:20494370-20528393 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000128914
Transcript ID Brain Heart Kidney Liver
ENSDART00000128914 15.906±6.46 8.682±6.08 4.678±1.15 0.720±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374680 RXRB-001 protein_coding Homo_sapiens 1e-35 156
ENST00000374685 RXRB-002 protein_coding Homo_sapiens 1e-35 156
ENST00000383216 RXRB-002 protein_coding Homo_sapiens 1e-35 156
ENST00000383217 RXRB-001 protein_coding Homo_sapiens 1e-35 156
ENST00000415157 RXRB-001 protein_coding Homo_sapiens 1e-35 156
ENST00000415909 RXRB-001 protein_coding Homo_sapiens 1e-35 156
ENST00000431161 RXRB-002 protein_coding Homo_sapiens 1e-35 156
ENST00000431820 RXRB-001 protein_coding Homo_sapiens 1e-35 156
ENST00000436753 RXRB-001 protein_coding Homo_sapiens 1e-35 156
ENST00000443603 RXRB-002 protein_coding Homo_sapiens 1e-35 156
ENST00000455462 RXRB-002 protein_coding Homo_sapiens 1e-35 156
ENST00000456244 RXRB-002 protein_coding Homo_sapiens 1e-35 156
ENST00000462174 RXRB-004 nonsense_mediated_decay Homo_sapiens 1e-35 156
ENST00000463338 RXRB-004 nonsense_mediated_decay Homo_sapiens 1e-35 156
ENST00000465169 RXRB-004 nonsense_mediated_decay Homo_sapiens 1e-35 156
ENST00000467727 RXRB-003 retained_intron Homo_sapiens 6e-36 156
ENST00000468440 RXRB-004 nonsense_mediated_decay Homo_sapiens 1e-35 156
ENST00000472425 RXRB-003 retained_intron Homo_sapiens 6e-36 156
ENST00000481441 RXRB-003 retained_intron Homo_sapiens 6e-36 156
ENST00000483281 RXRB-004 nonsense_mediated_decay Homo_sapiens 1e-35 156
ENST00000483648 RXRB-003 retained_intron Homo_sapiens 6e-36 156
ENST00000485267 RXRB-004 nonsense_mediated_decay Homo_sapiens 1e-35 156
ENST00000488725 RXRB-003 retained_intron Homo_sapiens 6e-36 156
ENST00000494616 RXRB-003 retained_intron Homo_sapiens 6e-36 156
ENST00000528918 RXRB-008 retained_intron Homo_sapiens 6e-36 156
ENST00000531100 RXRB-007 protein_coding Homo_sapiens 6e-36 156

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