C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcium channel, voltage-dependent, N type, alpha 1B subunit, b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000132142 cacna1bb-001 ENSDARG00000079295 7955 - 21:12633181-12832928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyENSDART00000132142
Transcript ID Heart Kidney
ENSDART00000132142 0.015±0.00 0.050±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121390 Cacna1a-001 protein_coding Mus_musculus 0 375
ENSMUST00000122053 Cacna1a-002 protein_coding Mus_musculus 0 375
ENSMUST00000126302 Cacna1a-006 retained_intron Mus_musculus 0 222
ENST00000277549 CACNA1B-201 protein_coding Homo_sapiens 0 272
ENST00000277551 CACNA1B-002 protein_coding Homo_sapiens 0 272
ENST00000371355 CACNA1B-202 protein_coding Homo_sapiens 0 272
ENST00000371357 CACNA1B-005 protein_coding Homo_sapiens 0 272
ENST00000371363 CACNA1B-003 protein_coding Homo_sapiens 0 272
ENST00000371372 CACNA1B-001 protein_coding Homo_sapiens 0 272

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