C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 5Ba
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000135443 kdm5ba-001 ENSDARG00000057093 7955 + 11:25754101-25785015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000135443
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000135443 16.640±10.31 11.762±0.35 8.359±0.45 0.671±0.00 5.846±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047714 Kdm5b-001 protein_coding Mus_musculus 0 691
ENSMUST00000112197 Kdm5b-002 retained_intron Mus_musculus 0 568
ENSMUST00000112198 Kdm5b-003 protein_coding Mus_musculus 0 691

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