C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lysine (K)-specific demethylase 5B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112197 Kdm5b-002 ENSMUSG00000042207 10090 + 1:134560207-134606791 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastENSMUST00000112197
Transcript ID Adrenal Breast
ENSMUST00000112197 9.316±1.32 5.814±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058729 kdm5ba-201 protein_coding Danio_rerio 0 568
ENSDART00000135443 kdm5ba-001 protein_coding Danio_rerio 0 568
ENST00000235790 KDM5B-002 protein_coding Homo_sapiens 0 1797
ENST00000367264 KDM5B-003 protein_coding Homo_sapiens 0 1212
ENST00000367265 KDM5B-001 protein_coding Homo_sapiens 0 2207
ENST00000456180 KDM5B-007 processed_transcript Homo_sapiens 0 669
ENST00000470573 KDM5B-006 processed_transcript Homo_sapiens 0 363
ENST00000602511 KDM5B-010 nonsense_mediated_decay Homo_sapiens 0 381

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