C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: si:ch73-18b11.1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000136067 si:ch73-18b11.1-001 ENSDARG00000093374 7955 - 20:2311593-2317979 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000136067
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000136067 29.715±0.00 7.930±1.68 1.521±0.00 1.209±0.00 10.613±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005198 IEA structural molecule activity
GO:0005856 IEA cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030739 Epb4.1-201 protein_coding Mus_musculus 0.00000000000004 86
ENSMUST00000054917 Epb4.1-007 protein_coding Mus_musculus 0.00000000000003 86
ENSMUST00000084253 Epb4.1-202 protein_coding Mus_musculus 0.00000000000003 86
ENSMUST00000105970 Epb4.1-003 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000105972 Epb4.1-001 protein_coding Mus_musculus 0.00000000000002 86
ENSMUST00000105974 Epb4.1-005 protein_coding Mus_musculus 0.00000000000003 86
ENSMUST00000105975 Epb4.1-008 protein_coding Mus_musculus 0.00000000000003 86
ENSMUST00000105981 Epb4.1-203 protein_coding Mus_musculus 0.00000000000003 86
ENSMUST00000135579 Epb4.1-009 protein_coding Mus_musculus 0.00000000000002 86
ENSMUST00000137846 Epb4.1-010 protein_coding Mus_musculus 0.00000000000003 86
ENSMUST00000144754 Epb4.1-002 processed_transcript Mus_musculus 0.00000000000004 86
ENSMUST00000146021 Epb4.1-004 processed_transcript Mus_musculus 0.00000000000003 86
ENSMUST00000146443 Epb4.1-014 protein_coding Mus_musculus 0.00000000000002 86
ENSMUST00000151746 Epb4.1-011 processed_transcript Mus_musculus 0.00000000000003 86
ENSMUST00000155990 Epb4.1-015 protein_coding Mus_musculus 0.00000000000002 86

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