C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gamma-aminobutyric acid (GABA) A receptor, alpha 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000138026 gabra5-001 ENSDARG00000070730 7955 - 6:38297800-38350182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000138026
Transcript ID Brain Heart Muscle
ENSDART00000138026 10.052±0.00 0.059±0.00 0.883±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LH CIL_0006LH_0001 CGP 6:38297800-38444389

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264318 GABRA4-001 protein_coding Homo_sapiens 0 248
ENST00000508560 GABRA4-004 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000511523 GABRA4-003 nonsense_mediated_decay Homo_sapiens 1e-28 132

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