C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAM metallopeptidase with thrombospondin type 1 motif, 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000138748 adamts6-001 ENSDARG00000041982 7955 - 10:11559894-11727823 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000138748
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000138748 0.071±0.03 0.229±0.00 0.098±0.00 0.005±0.00 0.008±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FW CIL_0007FW_0001 CGP 10:11364007-11727823

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065766 Adamts6-201 protein_coding Mus_musculus 0 1779
ENST00000314351 ADAMTS6-006 processed_transcript Homo_sapiens 0 460
ENST00000381052 ADAMTS6-008 nonsense_mediated_decay Homo_sapiens 0 1205
ENST00000381055 ADAMTS6-007 protein_coding Homo_sapiens 0 1808
ENST00000464680 ADAMTS6-009 retained_intron Homo_sapiens 0 1358
ENST00000470597 ADAMTS6-003 retained_intron Homo_sapiens 0 527
ENST00000502886 ADAMTS6-010 retained_intron Homo_sapiens 0 291

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