C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAM metallopeptidase with thrombospondin type 1 motif, 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381052 ADAMTS6-008 ENSG00000049192 9606 - 5:65148739-65481417 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000381052
Transcript ID Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000381052 0.026±0.00 0.038±0.00 0.087±0.01 0.116±0.11 0.006±0.00 0.062±0.04 0.125±0.00 0.162±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FW CIL_0007FW_0002 CGP 5:64768930-65481920

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008237 TAS metallopeptidase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065766 Adamts6-201 protein_coding Mus_musculus 0 3899
ENSDART00000009715 adamts6-201 protein_coding Danio_rerio 0 1205
ENSDART00000138748 adamts6-001 protein_coding Danio_rerio 0 1205

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