C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: POU class 6 homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000144186 pou6f2-001 ENSDARG00000086362 7955 + 24:9839895-10072942 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000144186
Transcript ID Heart Kidney Liver Muscle
ENSDART00000144186 0.075±0.02 0.178±0.07 0.024±0.00 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JU CIL_0007JU_0004 UCNEbase 24:9749543-10097646
CIL_0006I6 CIL_0006I6_0001 CGP 24:9839895-10110664

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139064 Pou6f2-001 protein_coding Mus_musculus 0 695
ENSMUST00000176795 Pou6f2-004 nonsense_mediated_decay Mus_musculus 0 568
ENST00000403058 POU6F2-002 protein_coding Homo_sapiens 0 763
ENST00000416452 POU6F2-005 nonsense_mediated_decay Homo_sapiens 0 616
ENST00000559001 POU6F2-011 protein_coding Homo_sapiens 0 710

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