C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU class 2 homeobox 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000146480 pou2f1b-001 ENSDARG00000007996 7955 + 9:35290637-35323921 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000146480
Transcript ID Brain Heart Kidney Muscle
ENSDART00000146480 1.503±0.64 0.075±0.02 0.207±0.00 0.577±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027W CIL_00027W_0001 CGP 9:35290637-35340146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027850 Pou2f1-006 protein_coding Mus_musculus 0 508
ENSMUST00000069609 Pou2f1-005 protein_coding Mus_musculus 0 556
ENSMUST00000082225 Pou2f1-010 retained_intron Mus_musculus 0 244
ENSMUST00000111426 Pou2f1-009 protein_coding Mus_musculus 0 556
ENSMUST00000111427 POU2F1-201 protein_coding Mus_musculus 0 556
ENSMUST00000111429 Pou2f1-003 protein_coding Mus_musculus 0 556
ENSMUST00000159212 Pou2f1-012 protein_coding Mus_musculus 0 556
ENSMUST00000160260 Pou2f1-001 protein_coding Mus_musculus 0 556
ENSMUST00000160908 Pou2f1-002 protein_coding Mus_musculus 0 556
ENSMUST00000176101 Pou2f1-007 retained_intron Mus_musculus 0.000000000000004 88
ENSMUST00000176942 Pou2f1-008 retained_intron Mus_musculus 0 556
ENSMUST00000177358 Pou2f1-013 protein_coding Mus_musculus 0.0000008 58
ENSMUST00000177472 Pou2f1-015 retained_intron Mus_musculus 0 556
ENSMUST00000184643 Pou2f1-016 protein_coding Mus_musculus 0 556
ENST00000271411 POU2F1-001 nonsense_mediated_decay Homo_sapiens 0 603
ENST00000367862 POU2F1-003 protein_coding Homo_sapiens 0 603
ENST00000367865 POU2F1-004 processed_transcript Homo_sapiens 0 603
ENST00000367866 POU2F1-002 protein_coding Homo_sapiens 0 603
ENST00000420254 POU2F1-014 protein_coding Homo_sapiens 0 243
ENST00000429375 POU2F1-010 protein_coding Homo_sapiens 0 549
ENST00000442313 POU2F1-007 nonsense_mediated_decay Homo_sapiens 8e-16 88
ENST00000443275 POU2F1-005 protein_coding Homo_sapiens 0 603
ENST00000492850 POU2F1-006 processed_transcript Homo_sapiens 0.0000000000002 81
ENST00000541643 POU2F1-017 protein_coding Homo_sapiens 0 603
ENST00000557909 POU2F1-016 processed_transcript Homo_sapiens 6e-18 95
ENST00000559038 POU2F1-012 processed_transcript Homo_sapiens 1e-20 104
ENST00000559648 POU2F1-015 processed_transcript Homo_sapiens 0 244
ENST00000560232 POU2F1-011 nonsense_mediated_decay Homo_sapiens 0.000000000000002 88

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