C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenoprotein 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000148208 sep15-001 ENSDARG00000074940 7955 + 2:23182115-23192145 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000148208
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000148208 22.073±13.38 51.166±15.13 48.641±0.00 4.141±0.00 13.266±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UJ CIL_0000UJ_0001 CGP 2:23147745-23192145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005788 ISS endoplasmic reticulum lumen
GO:0008430 ISS selenium binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082437 Sep15-001 protein_coding Mus_musculus 0 298
ENSMUST00000144859 Sep15-003 processed_transcript Mus_musculus 0 298
ENSMUST00000151086 Sep15-004 retained_intron Mus_musculus 7e-28 128

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