C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082437 Sep15-001 ENSMUSG00000037072 10090 + 3:144570426-144597680 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082437
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082437 167.473±16.03 31.870±22.57 6.854±0.00 15.265±1.20 8.440±3.65 28.069±1.05 67.351±40.40 61.632±5.81 37.417±3.40 84.202±9.87 82.273±60.10 21.638±16.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UJ CIL_0000UJ_0002 CGP 3:144431103-144597680

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005788 ISS endoplasmic reticulum lumen
GO:0008430 IDA selenium binding
GO:0051084 TAS 'de novo' posttranslational protein folding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000148208 sep15-001 protein_coding Danio_rerio 0 298
ENST00000331835 SEP15-001 protein_coding Homo_sapiens 0 797
ENST00000370554 SEP15-002 protein_coding Homo_sapiens 0 337
ENST00000467557 SEP15-004 processed_transcript Homo_sapiens 0 300
ENST00000469566 SEP15-003 processed_transcript Homo_sapiens 0 595
ENST00000611507 SEP15-201 protein_coding Homo_sapiens 0 316
ENST00000616787 SEP15-202 protein_coding Homo_sapiens 0 776

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