C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorting nexin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000148463 snx6-001 ENSDARG00000058444 7955 - 17:9828220-9860451 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000148463
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000148463 7.118±4.83 4.907±2.12 10.326±1.48 0.268±0.00 0.960±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RF CIL_0005RF_0001 CGP 17:9816402-9860451
CIL_0005RE CIL_0005RE_0001 CGP 17:9828220-9890018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0007154 IEA cell communication
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005798 Snx6-201 protein_coding Mus_musculus 0 828

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