C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000148816 PTPRM-001 ENSDARG00000089172 7955 + 2:59848058-59864896 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000148816
Transcript ID Brain Heart Liver Muscle
ENSDART00000148816 14.128±5.72 1.640±1.32 0.162±0.00 2.331±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0006470 IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037974 Ptprm-201 protein_coding Mus_musculus 0 475
ENST00000332175 PTPRM-001 protein_coding Homo_sapiens 0 457
ENST00000400053 PTPRM-003 protein_coding Homo_sapiens 0 457
ENST00000400060 PTPRM-201 protein_coding Homo_sapiens 0 457
ENST00000577827 PTPRM-013 retained_intron Homo_sapiens 0 359
ENST00000580170 PTPRM-012 protein_coding Homo_sapiens 0 457
ENST00000583153 PTPRM-016 protein_coding Homo_sapiens 0 307

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