C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyroid hormone receptor alpha b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000153187 thrab-001 ENSDARG00000052654 7955 - 12:23154548-23394768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000153187
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000153187 0.532±0.00 0.477±0.19 0.402±0.00 0.018±0.00 0.228±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0003708 IEA retinoic acid receptor activity
GO:0004887 IEA thyroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0048384 IEA retinoic acid receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103139 Thra-003 protein_coding Mus_musculus 0 843
ENST00000280696 THRB-003 protein_coding Homo_sapiens 0 507
ENST00000356447 THRB-001 protein_coding Homo_sapiens 0 507
ENST00000396671 THRB-201 protein_coding Homo_sapiens 0 507
ENST00000416420 THRB-004 protein_coding Homo_sapiens 0 507
ENST00000450525 THRA-002 protein_coding Homo_sapiens 0 915
ENST00000546243 THRA-006 protein_coding Homo_sapiens 0 915

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