C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jumonji domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000153856 jmjd6-001 ENSDARG00000034358 7955 - 3:61195550-61205542 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000153856
Transcript ID Brain
ENSDART00000153856 1.141±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KF CIL_0003KF_0001 CGP 3:61193462-61208927

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002040 ISS sprouting angiogenesis
GO:0003723 IEA RNA binding
GO:0003727 ISS single-stranded RNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 ISS nucleoplasm
GO:0005730 ISS nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006397 IEA mRNA processing
GO:0006909 IMP phagocytosis
GO:0007275 IEA multicellular organismal development
GO:0008380 IEA RNA splicing
GO:0016491 IEA oxidoreductase activity
GO:0016568 IEA chromatin modification
GO:0018395 ISS peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
GO:0030154 IEA cell differentiation
GO:0033746 ISS histone demethylase activity (H3-R2 specific)
GO:0033749 ISS histone demethylase activity (H4-R3 specific)
GO:0046872 IEA metal ion binding
GO:0048024 ISS regulation of mRNA splicing, via spliceosome
GO:0051213 IEA dioxygenase activity
GO:0055114 ISS oxidation-reduction process
GO:0070078 ISS histone H3-R2 demethylation
GO:0070079 ISS histone H4-R3 demethylation
GO:0070815 ISS peptidyl-lysine 5-dioxygenase activity

Homologs

No Homologs available.

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