C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysyl oxidase-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000707 Loxl3-001 ENSMUSG00000000693 10090 + 6:83034173-83052562 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartOvaryENSMUST00000000707
Transcript ID Adipose Bladder Breast Heart Ovary
ENSMUST00000000707 11.333±1.98 7.628±0.73 5.035±0.00 2.098±0.00 9.428±2.24

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001837 ISS epithelial to mesenchymal transition
GO:0005044 IEA scavenger receptor activity
GO:0005507 IEA copper ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0016641 IEA oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000112473 loxl5b-201 protein_coding Danio_rerio 0.000000003 69
ENSDART00000146160 loxl5b-001 protein_coding Danio_rerio 0.000000003 69
ENST00000258080 HTRA2-001 protein_coding Homo_sapiens 0 377
ENST00000264094 LOXL3-001 protein_coding Homo_sapiens 0 3230
ENST00000352222 HTRA2-002 protein_coding Homo_sapiens 0 375
ENST00000393937 LOXL3-002 protein_coding Homo_sapiens 0 1899
ENST00000409249 LOXL3-005 protein_coding Homo_sapiens 0 1175
ENST00000409549 LOXL3-004 protein_coding Homo_sapiens 0 1347
ENST00000409986 LOXL3-003 protein_coding Homo_sapiens 0 1646
ENST00000413469 LOXL3-007 protein_coding Homo_sapiens 0 981
ENST00000420535 LOXL3-009 protein_coding Homo_sapiens 0 516
ENST00000437202 HTRA2-005 protein_coding Homo_sapiens 0 326
ENST00000462909 HTRA2-003 processed_transcript Homo_sapiens 0 291
ENST00000467961 HTRA2-004 processed_transcript Homo_sapiens 0 351
ENST00000470907 LOXL3-006 retained_intron Homo_sapiens 0 2250
ENST00000484352 HTRA2-006 retained_intron Homo_sapiens 0 357
ENST00000484369 LOXL3-010 processed_transcript Homo_sapiens 0 789

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