C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromatin target of PRMT1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001043 Chtop-004 ENSMUSG00000001017 10090 - 3:90498956-90509451 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000001043
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000001043 9.728±6.09 17.108±2.49 25.582±9.76 7.322±1.97 3.425±0.00 6.952±2.09 7.131±2.11 12.030±2.51 14.285±0.99 9.521±1.21 12.068±2.99 11.023±2.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000346 IEA transcription export complex
GO:0005515 IPI protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006406 IEA mRNA export from nucleus
GO:0016607 IEA nuclear speck
GO:0032781 IEA positive regulation of ATPase activity
GO:0044822 IEA poly(A) RNA binding
GO:0051096 IEA positive regulation of helicase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368686 CHTOP-005 protein_coding Homo_sapiens 0 490
ENST00000368687 CHTOP-004 protein_coding Homo_sapiens 0 1596
ENST00000368690 CHTOP-201 protein_coding Homo_sapiens 0 1349
ENST00000368694 CHTOP-001 protein_coding Homo_sapiens 0 1330
ENST00000403433 CHTOP-002 protein_coding Homo_sapiens 0 551
ENST00000495554 CHTOP-003 processed_transcript Homo_sapiens 0 905
ENST00000614256 CHTOP-202 protein_coding Homo_sapiens 0 532

Loading